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Trimmomatic

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General Description

Trimmomatic version 0.32

Basic Usage

module load bio #to load all bio modules
module load bio/trimmomatic/0.32 #to load trimmomatic alone

Useful Options

Please type "trimmomatic" to run
Usage: 
       PE [-threads <threads>] [-phred33|-phred64] [-trimlog <trimLogFile>] [-basein <inputBase> | <inputFile1> <inputFile2>] [-baseout <outputBase> | <outputFile1P> <outputFile1U> <outputFile2P> <outputFile2U>] <trimmer1>...
   or: 
       SE [-threads <threads>] [-phred33|-phred64] [-trimlog <trimLogFile>] <inputFile> <outputFile> <trimmer1>...

Further Information

See the official website: [http:// ]